[Staden] gap4 does not run

Damien marsicd at removethis.uah.edu
Wed Apr 26 19:28:02 EST 2006

Thank you very much. Now it works great.


Paul Donohue wrote:
> http://www.bio.net/bionet/mm/staden/2006-January/001358.html
> On Wed, Apr 26, 2006 at 12:10:29AM +0000, Damien wrote:
>>I downloaded the Staden package and tried to use it. Unfortunately, the
>>program gap4 refuses to start (while othe programs like trev of pregap4
>>run fine).
>>When I try to start gap4, I get the following message:
>>invalid command name "load_alignment_matrix"
>>    while executing
>>"load_alignment_matrix       [keylget gap_defs ALIGNMENT.MATRIX_FILE]"
>>    (file "/home/damien/BIN/staden-linux-1-6-0/lib/gap/gap.tcl" line 683)
>>I would appreciate if someone could tell me what to do. My OS is Kubuntu
>>Linux (Debian based).
>>Staden mailing list
>>Staden at net.bio.net

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