STADEN QUESTION! gap4sh in 2001

jkb at mrc-lmb.cam.ac.uk jkb at mrc-lmb.cam.ac.uk
Wed Jan 16 10:02:50 EST 2002

In <3C456EA8.B9AD1F85 at bbsrc.ac.uk> Simon Andrews <simon.andrews at bbsrc.ac.uk> writes:

> For reasons unknown to me (I copied this out of the example scripts),
> our Staden tcl scripts start;

Oops, our example scripts should be fixed.

> ----------------------------------------
> #!/usr/bin/sh
> # \
> exec gap4sh -f "$0" ${@+"$@"} || exit 1
> load_package gap

Try replacing gap4sh with stash and it'll work.
Stash is a generalised replacement for gap4sh and spinsh (was nip4sh /
sip4sh). Stash has been able to work this way for several releases, but we
only recently decided to ditch gap4sh.

James Bonfield (jkb at mrc-lmb.cam.ac.uk)   Fax: (+44) 01223 213556
Medical Research Council - Laboratory of Molecular Biology,
Hills Road, Cambridge, CB2 2QH, England.
Also see Staden Package WWW site at http://www.mrc-lmb.cam.ac.uk/pubseq/

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