pregap, bourne vs C-shell

Stephen Baird sbaird at mgcheo.med.uottawa.ca
Tue Mar 12 13:56:39 EST 1996

Dear users of pregap,
   Our normal shell on SUNOS 4.1.1 is the C-shell but pregap is a Bourne 
shell script. For some unknown reason it does not always work. The main 
problem seems to be during the use of "vepe" when rewriting the 
${fofn}.passed file while using "sed" to remove the spaces from the 
output files from vepe. It has worked sometimes but I can not figure out 
why. I'll rewrite the script as a C-Shell if no one knows what might 
cause this problem. I keep thinking that the environment variables change 
somehow from one use to another, but I can't see any change.

Any suggestions would be appreciated.

| Stephen Baird                        sbaird at mgcheo.med.uottawa.ca  | 
| Molecular Genetics                       tel: 613-738-3925         |
| Children's Hospital of Eastern Ontario   fax: 613-738-4833         |
| 401 Smyth Rd.                                                      |
| Ottawa, Ontario                                                    |
| Canada                                                             |
| K1H 8L1                                                            |

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