gap4,vepe, and multiple vector/primers

James Bonfield jkb at mrc-lmb.cam.ac.uk
Mon Feb 26 04:24:34 EST 1996

Stephen Baird wrote:

>Does anyone know how I can process a bunch of sequences which have a 
>variety of of vectors, insert sites and primers without having to 
>separate them all in their various groups?

Use Pregap with an external database (where database can be as simple as a
plain text file listing the sequences and vectors). The documentation on this
has recently been improved. I suggest that you read our WWW documentation on
Pregap. See http://www.mrc-lmb.cam.ac.uk/pubseq/manual/pregap_toc.html
I'm happy to answer and other queries that you have and will update the manual
too if necessary.

James Bonfield (jkb at mrc-lmb.cam.ac.uk)   Tel: 01223 402499   Fax: 01223 412282
Medical Research Council - Laboratory of Molecular Biology,
Hills Road, Cambridge, CB2 2QH, England.
Also see Staden Package WWW site at http://www.mrc-lmb.cam.ac.uk/pubseq/

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