Stephen Baird wrote:
>Does anyone know how I can process a bunch of sequences which have a
>variety of of vectors, insert sites and primers without having to
>separate them all in their various groups?
Use Pregap with an external database (where database can be as simple as a
plain text file listing the sequences and vectors). The documentation on this
has recently been improved. I suggest that you read our WWW documentation on
Pregap. See http://www.mrc-lmb.cam.ac.uk/pubseq/manual/pregap_toc.html
I'm happy to answer and other queries that you have and will update the manual
too if necessary.
James Bonfield (jkb at mrc-lmb.cam.ac.uk) Tel: 01223 402499 Fax: 01223 412282
Medical Research Council - Laboratory of Molecular Biology,
Hills Road, Cambridge, CB2 2QH, England.
Also see Staden Package WWW site at http://www.mrc-lmb.cam.ac.uk/pubseq/