Hello Everybody,
I am writing to you to seek your help in solving my problem. I have two
sets of sequences each is 77 sequences (ranging from 40 b.p to 5000 b.p.),
and I am trying to find out a short pattern that is found in set 1 but not
in set 2 (or the other way) . Does HMMR do the job ? If not which program
can help knowing that I am getting errors if I align them. Could you
please help in solving this problem.
Thanks,
