PAUP in GCG seqlab

Mike Challen mike.challen at talk21.com
Wed Feb 7 08:04:27 EST 2001

I am trying to use PAUPsearch with an msf file that contains nucleotide
and 0-1 data.  The 0-1 data encodes significant gap/indel presence or
absence.  This type of file runs OK in PHYLIP analyses but I'm
struggling to get the data into PAUPsearch. The program just crashes
with an 'not a GCG file' type of message.  If I remove the 0-1 data it
runs OK. Any suggestions of how to proceed, please? I don't have access
to PAUP outside of GCG.


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