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Plot GC content?

Paul Roy proy at rsvs.ulaval.ca
Fri Oct 27 12:36:25 EST 2000


On Fri, 27 Oct 2000, Raymond Dalgleish wrote:

> Is there some way within GCG to plot the GC
> content of a DNA sequence. The composition
> program only calculates the base composition
> but does not plot it.
> 
You can do this with WINDOW and STATPLOT.  In WINDOW, specify function
     b) percent  of patterns observed
and pattern S (IUB code for G or C)

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 Paul H. Roy                             Phone:  +1 418 654 2705
 Departement de biochimie,FSG            FAX:    +1 418 654 2715
 Universite Laval                        E-mail: proy at rsvs.ulaval.ca
 Quebec, QC  G1K 7P4
 CANADA

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