IUBio

Problems with GCG installation with Solaris 7

Dr. Greg Quinn greg at franklin.burnham-inst.org
Sat Mar 4 15:30:02 EST 2000


You need to install the fortran runtime libraries found on the 
GCG distribution CD

I am not Mr. Gnu (jason at phoenix.umesci.maine.edu) wrote:
: 
: --------------10BC757E63A109E653717BCD
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: 
: Hello,
: 
: I'm having some problems getting the Fortran libraries working and get
: this error whenever I try pileup or other assorted functions in Seqlab:
: 
: 
: ********************
: Fri Mar  3 12:42:18 EST 2000
: SeqLab sources gcgshell...
: 
: 
: ********************
: Fri Mar  3 12:42:18 EST 2000
: SeqLab runs pileup using init file...
: ..
: -Infile=@/home/admin/distel/.seqlab-phoenix/pileup_2.list
: !seqlabtemporary
: -Figure=/home/admin/distel/pileup_2.figure !seqlabfigure
: -out=/home/admin/distel/pileup_2.msf !seqlabseq
: -Default
: 
: ld.so.1: /usr/local/gcg/gcgbin/execute/pileup: fatal: relocation error:
: file /usr/lib/libF77.so.2: symbol ___ansi_fflush: referenced symbol not
: found
: Killed
: 
: ********************
: Fri Mar  3 12:42:19 EST 2000
: SeqLab job completed
: 
: 
: Has anyone encountered this problem, and more importantly, found a
: solution for it?  Thanks!
: 
: 
: --
: ----------------------------------------------------------
: Jason Joy, BMMB Unix and Computer Administrator
: 240 and 179 Hitchner Hall, University Of Maine
: ----------------------------------------------------------
: 
: 
: 
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: 
: <!doctype html public "-//w3c//dtd html 4.0 transitional//en">
: <html>
: Hello,
: <p>I'm having some problems getting the Fortran libraries working and get
: this error whenever I&nbsp;try pileup or other assorted functions in Seqlab:
: <p>&nbsp;
: <br>********************
: <br>Fri Mar&nbsp; 3 12:42:18 EST 2000
: <br>SeqLab sources gcgshell...
: <br>&nbsp;
: <br>&nbsp;
: <br>********************
: <br>Fri Mar&nbsp; 3 12:42:18 EST 2000
: <br>SeqLab runs pileup using init file...
: <br>..
: <br>-Infile=@/home/admin/distel/.seqlab-phoenix/pileup_2.list !seqlabtemporary
: <br>-Figure=/home/admin/distel/pileup_2.figure !seqlabfigure
: <br>-out=/home/admin/distel/pileup_2.msf !seqlabseq
: <br>-Default
: <br>&nbsp;
: <br>ld.so.1: /usr/local/gcg/gcgbin/execute/pileup: fatal: relocation error:
: file /usr/lib/libF77.so.2: symbol ___ansi_fflush: referenced symbol not
: found
: <br>Killed
: <br>&nbsp;
: <br>********************
: <br>Fri Mar&nbsp; 3 12:42:19 EST 2000
: <br>SeqLab job completed
: <br>&nbsp;
: <p>Has anyone encountered this problem, and more importantly, found a solution
: for it?&nbsp; Thanks!
: <br>&nbsp;
: <pre>--&nbsp;
: ----------------------------------------------------------
: Jason Joy, BMMB Unix and Computer Administrator
: 240 and 179 Hitchner Hall, University Of Maine
: ----------------------------------------------------------</pre>
: &nbsp;</html>
: 
: --------------10BC757E63A109E653717BCD--
: 
: ---

-- 
*****************************************
Computational Biology Group
The Burnham Institute
(formerly La Jolla Cancer Research Inst.)
10901 North Torrey Pines road
La Jolla
CA92037
 
Phone:(619) 646 3103
Email: greg at franklin.ljcrf.edu
http://franklin.ljcrf.edu/greg
http://www.greg.com/
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