In article <34D34EA3.5EF32769 at erfurt.thur.de>, Thorsten Burmester
<thorsten.burmester at erfurt.thur.de> wrote:
> Hi out there,
>> Do you know a way to force the PLOTSIMILARITY program to give a
> numerical output instead of the plot? Or some similar program which can
> do this?
You can use a command line option:
-outfile=somefilename
and you would get a file like:
PLOTSIMILARITY of: peplist.msf{*} from: 1 to: 460
Window: 10
Scoring matrix: GenRunData:blosum62.cmp
February 9, 1998 10:07
Position Value ..
5 2.3
6 2.7
7 2.7
8 2.6
9 2.6
10 2.8
11 2.8
12 2.6
Hope this helps.
--
Michael Mitchell "Smoke me a kipper,
User Support I'll be back for breakfast."
Molecular Biology Software Ace Rimmer, Test Pilot
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