I am getting a core dump - floating point exception when runnning 9.0
FASTA against the Eukaryotic Promoter Database (EPD) from Phillip
Bucher.
I am building the GCG formatted files from the file that includes
sequence data from -499 to +100 around the promoter.
I have tested the formatted files with stringsearch, fetch and
wordsearch as well. All of these work.
I went back and dug out 8.1 and tried the old FASTA. This also works.
Anybody else come across this problem? the only thing I can think of
that could be a problem is the high number of Ns in the sequences.
However as 8.1 handled it why doesnt 9.0?
Regards
Aengus
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Aengus Stewart aengus.stewart at icrf.icnet.uk
Bioinformatics Support Tel: +44 (0)171 269 3679
Imperial Cancer Research Fund
Lincoln's Inn Fields, Holborn, London, WC2A 3PX, UK
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