IUBio

codon frequency tables

Martin Hilbers mph at dl.ac.uk
Tue Oct 7 03:10:50 EST 1997


Bruce Ritchings wrote:
> 
> Hello Netters,
>         Can someone point me to a source for codon frequency tables for:
> 1) human
> 2) mouse
> 3) Drosophila
> 
> Optimally, it would be great to have them in a computer format which would
> plug right into the GCG software, but I'll be grateful for anything I can get!
> 
> Thanks in advance, Bruce Ritchings
> 
> britchings at ucsd.edu

Our srs server ( http://www.seqnet.dl.ac.uk/srsc/srs ) gives
access to cutg (codon usage tabulated from genbank) in gcg
format.

human      - http://www.seqnet.dl.ac.uk/srs/srsc?[CUTG-id:4272]
mouse      - http://www.seqnet.dl.ac.uk/srs/srsc?[CUTG-id:4452]
dorsophila - http://www.seqnet.dl.ac.uk/srs/srsc?[CUTG-id:1672]

Cheers,
Martin

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