Parsing findpatterns output

[Francois Jeanmougin]

	Hi all,

	If you use findpatterns, you can have this (standard output):

           BT09237_1  ck: 8916  len: 910   ! U09237 product: "auxilin";...

1                     (L,I,V,M,F)HCXXGXXX(S,T,C)(S,T,A,G)X(L,I,V,M,F,Y)
                                    (V)HCxxGxxx(S)(S)x(L)
           159: KNVCV                   VHCLDGRAASSIL                   VGAMF


	Or this (FOSN output):

     TRREL:BT09237_1  ck: 8916  len: 910    finds: 1    ! U09237 product: ...


	But what I need is this:

TRREL:BT09237_1 Begin:100 End:200 ! comments

	So that I can use this as input for other programmes. I could do
such programme, but if someone already done, this could be faster.

				Thanks for any help,

							François.
-- 
François Jeanmougin     | groupe de bioinformatique / bioinformatics groupe
tel:(+33) 3 88 65 32 71 | IGBMC BP 163 67404 Illkirch France