Francois JEANMOUGIN pingouin at crystal.u-strasbg.fr
Thu Mar 20 02:30:01 EST 1997

[...posting both in bionet and to help at gcg...]

In article <PMR.97Mar19163445 at unst.sanger.ac.uk>,
	pmr at sanger.ac.uk writes:
> Ah, you have found one of those little differences. SeqLab has an
> extra gap character (for gaps at the ends of sequences) so all code
> that looked for '.' now has to do more work.
> The changes to the default matrix files are tricky too. You have to
> remember which GCG version you are using if you have 8.1 and 9.0 both
> around.
	Also, the changes in the MSF format (which appears without the
PileUp word at the beginning), this from version 8 (I think). Would it
be possible for GCG to make a little page on their web site only describing
what is constant in a specific format? This will help the interaction
between GCG and other programms (like Clustal ;-).
	Well, before, we could have a look at sources, but now...
(I don't want to restart this story...).
					Just my 2p.
Francois Jeanmougin
Service de bioinformatique / bioinformatics service
IGBMC BP 163 67404 Illkirch France
tel :(France) 03 88 65 32 71 / (international) (+33) 3 88 65 32 71
e-mail : jeanmougin at igbmc.u-strasbg.fr
C'est pas parcequ'on monte au banc, qu'il faut descendre a jeun (Thiefaine)

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