Efremov Roman wrote:
>> Dear netters,
> Could anybody tell me how to get GenBank accession number for a given
> SWISS-PROT sequence name?
> Thank you in advance. Roman
If you look at the reference section of the SwissProt entry for
lines starting with "DR" you will see listed the EMBL (and other)
accession numbers. For example:
thunder_15% typedata sw:opsd_human | grep "^DR"
DR EMBL; K02281; G386990; -.
DR EMBL; U49742; G1236137; -.
DR EMBL; U16824; G575446; -.
DR PIR; A41200; OOHU.
DR GCRDB; GCR_0085; -.
DR MIM; 180380; -.
DR MIM; 268000; -.
DR PROSITE; PS00237; G_PROTEIN_RECEPTOR.
DR PROSITE; PS00238; OPSIN.
thunder_16% typedata genembl:K02281 | head
!!NA_SEQUENCE 1.0
LOCUS HSU49742 6953 bp DNA PRI
03-SEP-1996
DEFINITION Human rhodopsin gene, complete cds.
ACCESSION U49742 K02281
NID g1236136
KEYWORDS opsin; rhodopsin.
SOURCE human.
ORGANISM Homo sapiens
Eukaryotae; mitochondrial eukaryotes; Metazoa; Chordata;
Vertebrata; Eutheria; Primates; Catarrhini; Hominidae; Homo.
Hope this helps.
Steve Smith
steve.smith at gcg.com