Marlon --
I just tried to replicate your problem on our system, but the fasta
search ran as usual. You need to check that the logicals are set up to
point to the correct location of the databases, and to make sure that the
databases are correctly installed. I believe they need to be reinstalled when
you upgrade.
Ellis
In article <5clboi$kbf at paperboy.ccc.nottingham.ac.uk>, cczcole at unix.ccc.nottingham.ac.uk (Marlon Cole) writes:
|>|> I've just upgraded to Version 9 from 8.1 (on Digital Unix v.3.2D) and have
|> had reports from one of my users that his usual run of "fasta" searching
|> SwissProt:* now no longer works:
|> Using "fasta" and supplying a query sequence file, after the prompt:
|>|> " Search for query in what sequence(s) (* SwissProt:* *) ?"
|>|> we now get the error:
|>|> *** Search set "SwissProt:*" could not be read! ***
|>--
Ellis Golub Phone: (215) 898-4629
Biochemistry Department FAX: (215) 898-3695
University of Pennsylvania ellis at biochem.dental.upenn.edu
School of Dental Medicine
4001 Spruce Street
Philadelphia, PA 19104-6003
