ORFS program?

[Michael Kieras]

Please respond to ciufo at rna.micro.umass.edu.

Does anyone know of a program that will read in a DNA sequence
and provide a tabulated list of ORFS (ie: start and stop positions,
with frame?)

GCG's FRAMES and MAP provide something very similar, but there doesn't
seem to be a way of getting the ORF data without doing a lot of picking.

Suggestions are welcome.

Thanks,

Stacy Ciufo
University of Massachusetts

ciufo at rna.micro.umass.edu

-- Michael Kieras -------------------------------------------------
michael at oit.umass.edu       http://www-unix.oit.umass.edu/~michael/