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ORFS program?

Michael Kieras michael at janus.oit.umass.edu
Mon Aug 25 18:41:43 EST 1997


Please respond to ciufo at rna.micro.umass.edu.

Does anyone know of a program that will read in a DNA sequence
and provide a tabulated list of ORFS (ie: start and stop positions,
with frame?)

GCG's FRAMES and MAP provide something very similar, but there doesn't
seem to be a way of getting the ORF data without doing a lot of picking.

Suggestions are welcome.

Thanks,

Stacy Ciufo
University of Massachusetts

ciufo at rna.micro.umass.edu

-- Michael Kieras -------------------------------------------------
michael at oit.umass.edu       http://www-unix.oit.umass.edu/~michael/



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