IUBio Biosequences .. Software .. Molbio soft .. Network News .. FTP

wordup (EGCG) problem

Chris Botka botka at CGL.UCSF.EDU
Wed Aug 13 19:52:42 EST 1997


I am trying to get either the EGCG7.2-UNIX or the code distributed  
from area.ba.cnr.it for the wordup program to run on Digital UNIX.   
I can get the source from the ftp site to compile and the EGCG  
application compiled OK too, but neither seem to complete the  
search.

I get three different errors depending on the size of the search  
and whether I specify a pattern file or not.

-single sequence file no pattern specified: "Execution Terminated!"
-single sequence file pattern file specified: "Fatal error: Out of  
memory to allocate a Codified String
Execution Interrupted!"
-multiple sequence files: "Segmentation Fault"

Has anyone encountered these problems?  Any suggestions would be  
appreciated.

Thanks,

Chris


______
Christopher W Botka			Phone: (415)476-5379
Sequence Analysis Consulting Service	Fax: (415)502-1755
UCSF Computer Graphics Lab		Office: Lib-111
Internet: botka at cgl.ucsf.ed		Mail Drop: Box 0446
http://www.sacs.ucsf.edu/		NeXT/MIME mail OK



More information about the Info-gcg mailing list

Send comments to us at biosci-help [At] net.bio.net