In article <5ibs1d$1a3$1 at phri.phri.nyu.edu>, bergman at phri.nyu.edu says...
>>We're begining a new project that has the potential to involve a lot
>of pileups. I'm trying to get an idea of machine requirements for
>pileups of anywhere from 100~500 sequences, with 300~500 bases each.
>>We're running on a Sun Sparc10 currently.
>Mark Bergman bergman at phri.nyu.edu>System and Network Administrator 212-578-0822
>Public Health Research Institute Rm. 1074, 455 1st Ave, NY NY, 10016
On a DEC Alpha (333 MHZ) , a pileup of 200 sequences of 300 - 400 AA each
took about 15 minutes of CPU time.