Statistics help on Bestfit output

Steve Johnson sljohnsn at staff.uiuc.edu
Wed Nov 20 12:37:05 EST 1996

I can't remember my basic stats. If I run Bestfit on two sequences,
obtain a quality score, randomize on of the sequences and get an average
quality plus/minus SD, how do I then calculate the probability of gettin
my original quality score by chance alone. Can anyone help jump start my
failing memory. Thanks.

Steve Johnson
University of Illinois
sljohnsn at staff.uiuc.edu

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