IUBio

msf -> phylip fprmat

ajenkins ajenkins at nibsc.ac.uk
Fri Jan 5 07:07:33 EST 1996


Hi folks,

I've just had a quick scan of the phylip documentation, but couldnt find
what format phylip uses.

Can I use something like readseq to convert an .msf file into something
suitable for phylip; if so, what program/and option.

In other words how can I use phylip on a multiple seq alingment generaqted
with pileup in GCG

Please email me directly.

If there is enough response, I will summarise the solution9s0...


Enjoy....

Adrian

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

	NATIONAL INSTITUTE FOR BIOLOGICAL STANDARDS AND CONTROL
        (A W.H.O. International Laboratory for Standards)

	Adrian Jenkins
	Aids Collaborating Centre		Blanche Lane,
        e-mail     ajenkins at nibsc.ac.uk  	South Mimms
        voice      01707 654753 X 439		Potters Bar
	http://www.nibsc.ac.uk/			Hertfordshire
       						England EN6 3QG
 
"I think I'll write my tombstone - Here lies Edmund Blackadder, and he's
    bloody annoyed."
                                    Edmund Blackadder  BA IV 

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%




More information about the Info-gcg mailing list

Send comments to us at biosci-help [At] net.bio.net