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GCG/TREMBL prob

Aengus Stewart aengus.stewart at icrf.icnet.uk
Tue Dec 17 07:38:31 EST 1996


I have just recently updated TREMBL and most of the GCG programs will
not work with it properly.

I pulled the *.dat.Z files from the EBI, uncompressed and catted them
together to form a file called trembl.dat which I then ran embltogcg on.
After that seqcat and accessionnumbers.

The entries in sitelogicals and siteuserspecs are correct as eg
fasta starts OK but then stops after the first sequence.  Similar sort
of things are happening with STRINGSEARCH.  FETCH does work correctly.

Any ideas?

Aengus

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Aengus Stewart                          aengus.stewart at icrf.icnet.uk
Bioinformatics Support                  UK Tel: (0171) 269 3679
Imperial Cancer Research Fund
Lincoln's Inn Fields, Holborn, London, WC2A 3PX, UK
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