RNA folding

Frank Vreede frank at moon.ovi.ac.za
Tue Nov 21 12:11:47 EST 1995


I have been using GCG version 8.0 to do squiggles plots of RNA up to 1400 
bases in length. However, I would like to fold RNA of up to 4 kb in length. 
Does anybody know of software that can handle this, or any other 
suggestions for tackling the problem. I expect the 5' and 3' ends to form a 
partially double-stranded panhandle structure, but am not able to show this 
with the longer RNA's.


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