Dear netters,
I have compared several DNA sequences with Bestfit/Gap. Now, I want to
get a table of similarities. As these sequences have different lenghts, I want
to normalize the percent of identities obtained.
Is there an alternative to the Q-value that could give me a normalized
indicative value similar to the z-score?
I have used the RDF2 program for evaluate protein alignments but I'm
not sure if this program could be used for DNA sequences. If not, what program
may I use?
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/_/_/_/_/ _/ _/ _/ _/
_/ _/ _/ _/ _/ _/
_/ _/ _/ _/ _/ _/ _/ Enrique Viguera Minguez
_/_/_/ _/ _/ _/ _/ _/ _/ Centro de Investigaciones Biologicas
_/ _/ _/ _/ _/ _/ _/ Velazquez 144, 28006
_/ _/ _/ _/ _/ _/ MADRID, Spain
/_/_/_/_/ . _/_/ . _/ _/ .
Phone: 34-1-5611800. Ext. 4240
e-mail: CIBVM69 at CC.CSIC.ES
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