lluis at aaRS (Lluis Ribas) writes:
> I am having troubles modiifying a PileUP MSF file
> by hand for which I wnat, later, to obtain a
> profile with PROFILEMAKE.
> Basicly I am taking the MSF file, editing it manually,
> and trying to use it with PROFILEMAKE. But the program
> claims that the alignment is not in GCG format.
You absolutely have to REFORMAT the MSF before you can use it again.
Type:
reformat -msf pileup.msf{*} on UNIX
or
reformat /msf pileup.msf{*} on VMS
and your MSF will be useable again.
Good luck,
Jack
--
Jack A.M. Leunissen, Ph.D. | CAOS/CAMM Center, Univ. of Nijmegen
Email: jackl at caos.kun.nl | Toernooiveld
Tel. : +31 80 65 22 48 | 6525 ED Nijmegen, The Netherlands
Fax : +31 80 65 29 77 | URL=http://www.caos.kun.nl/
