profile-3D sequence search

Chyh-chong Chuang ccchuang at GATE.SINICA.EDU.TW
Thu Dec 28 06:01:25 EST 1995

Dear Sir:
 	By  insightII's profile 3D modual, I created a profile file of a 
 sequence with known 3D structure. Is it possible to do a structural 
 compability sequence search of some database, like SwissPort, EMBL ..., 
 base on the insightII's profile file.
 	GCG support a profile search (profilesearch command) base on a 
 sequence's profile file. It seems that the GCG's profile is not 
 calculate from a know 3D structure and sequence.   
 Any comment and suggestion will be great appreciated. Thanks all.
 Happy new year.

ps. I am not member of this group, so please reply to me at 
ccchuang at gate.sinica.edu.tw, thanks.


    Chyh-Chong Chuang
    Institude of Biological Chemistry, 
    Academia Sinica,Taipei, Taiwan
    P.O. BOX 23-106,      Phone: 886-2-362-0261 ext 2021
    Taipei, Taiwan,       Fax: 886-2-363-5038
    R.O.C.                E-Mail: ccchuang at gate.sinica.edu.tw

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