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AA 3 letter to 1 letter code

Christoph Weber cweber at oci.unizh.ch
Fri Nov 4 08:13:58 EST 1994


Hi all,

I have to pull out sequences from PDB files and get them into GCG format.

In the PDB files the three letter code is used, while GCG only accepts
one letter codes.
I poked around in the help files for a utility to translate between the
two representations, but haven't found anything.
In NBRL3D, I found about half of my sequences and successfully downloaded them
in a GCG readable format, but it's the ones not in NBRL3D (yet) that bug me.

Does anyone out there know how to go about this?

Thanks in advance,
Christoph
--
Christoph Weber                     email: cweber at oci.unizh.ch
OCI  Uni Zurich                     phone: +41 1 257 4925
Winterthurerstr. 190                FAX:   +41 1 361 9895
CH-8057 Zurich,  Switzerland



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