I think the problem may be the inability of GCG to understand
the @ command at this level. I use VMS and the I put all my
options right on the command line
eg..,
$ pileup @seqs.fil /bat /nosort /line= ...... and so on..
should work.
Good luck.
Raj Shanakarappa
bsh at med.pitt.edu
> Hi GCGers,
>
> I have just discovered a problemette.
>
> If I construct a file of sequence names containing a number of sequences
> called seqs.fil and in response to 'What sequences' type @seqs.fil Pileup just
> sits there until I press CTRL Z when it inputs each sequence. If however I
> have all the sequences and in response to 'What sequence' type *.pep it
> swallows the sequences straight away.
>
> Has anybody else had this problem or am I doing something dumb?
>
> (Oh on a VAX 7610 - VMS version 5.5-2 Version 7.3 of Wisconsin Package)
>
> Cheers,
>
> Tony P.
>
> parsons_a at snd01.pcr.co.uk
>
