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NRL-3D database into GCG format?

pathology at mscf.med.upenn.edu pathology at mscf.med.upenn.edu
Tue Jan 4 21:25:03 EST 1994


Can anyone comment on the ease of converting the NRL-3D database (amino acid 
sequence database of proteins in the Brookhaven Protein Databank) to a format 
suitable for GCG programs?  Any general advice on how to do the conversion?  
The NRL-3D database is available from a University of Houston server 
(ftp.bchs.uh.edu), and the files are in PIR format.  I am unfamiliar with the 
PIR format and am not sure how all of the files should be installed in a 
directory on a VMS operating system for use by GCG software.  Thanks for any  
help. 

Gregg Wells
Department of Pathology
University of Pennsylvania
Philadelphia, PA  19104-4283
email:  pathology at a1.mscf.upenn.edu




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