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EGCG Fastacheck

Peter Rice rice at embl-heidelberg.de
Sun Feb 6 08:36:27 EST 1994


In article <2iple5$pae at dingo.cc.uq.oz.au>, andrew at qimr.edu.au (Andrew Healey)
writes:
> OK, here's a question from one of our students for one of you guru's
> from Heidelberg.
> The student couldn't get fastacheck to work on a valid .fasta output.
> I tried also and the program touches a .check file for output then
> stops midway without writing any output, thus leaving a file of zero
> size. At  first I thought this was because nothing significant was found
> but even when a sequence is fasta'd against itself (perfect match) the
> fastacheck program comes to a stop.
> Any ideas?

I was unaware of any problem. If you mail me privately with details of the
EGCG version you are using (VMS (VAX or ALPHA), Unix (which one)), and the
origin of the FASTA output (GCG, original, E-mail, or whatever) I will
take a look.

 -----------------------------------------------------------------------------
 Peter Rice, EMBL                             | Post: Computer Group
                                              |       European Molecular
 Internet:    Peter.Rice at EMBL-Heidelberg.DE   |            Biology Laboratory
                                              |       Postfach 10-2209
 Phone:   +49-6221-387247                     |       69012 Heidelberg
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