Hi,
I have a set of fingerprint motifs (Prosite, Prints) of interest which
include the accession numbers of all proteins which have such a motif.
Can I do a FASTA-type search on a file containing just the accession numbers
of these proteins?
Or do I have to all these sequences (hundreds) from the databases
with FETCH, give them names, put these names in a file, use this file to do
FASTA? In this case, can I automate the fetch process?
Thanks for any suggestions!
Stephane
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Stephane Vuilleumier
Mikrobiologisches Institut
ETH-Zurich
ETH-Zentrum/LFV Phone: (+41) 1 632 33 57
8092 Zurich Fax: (+41) 1 6
