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suggestions for new programs

Gary Williams gwilliam at hgmp.mrc.ac.uk
Tue Dec 6 10:45:24 EST 1994


We have a large number of users of the GCG package, and a fairly common
request is for more specific searching programs to produce lists of
sequence names:

search for sequences within a length range
search for genomic or mRNA or coding nucleotide sequences
search for peptide sequences within a weight range

Also a very common request is for a program like pretty that produces a
display of an input nucleotide sequence with its translation, in
selected frame(s), underneath.  The translation should be optionally in
3-letter code. 

Comments anyone?

Just my 2 pence worth,
Gary Williams

Computing Services Section,                    Email: G.Williams at hgmp.mrc.ac.uk
MRC Human Genome Mapping Project Resource Centre,             Tel: 01223 494522
Hinxton Hall, Hinxton, Cambridge, CB10 1RQ, UK
<a href=http://www.hgmp.mrc.ac.uk/>UK MRC HGMP Resource Centre</a> 




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