IUBio

how to make a graphic secondary structure with letters ?

Massimo Delledonne DELLE%IPCUCSC.earn at uk.ac.earn-relay
Fri Aug 27 11:07:34 EST 1993


Hi GCG users,
I'm using FOLD to predict RNA secondary structures and SQUIGGLES to plot the re
sults.. The output look very nice, but the secondary structures are curves with
out the corresponding base's letters
Since I need (for a paper) to show secondary structures with letters instead of
 curves, I'm wondering if it is possible to obtain a similar output using GCG.
I can't use the no-graphic output of FOLD because it is not good enough ...
(And my sequence is long a lot ...)
 
Any suggestion ?
 
Thanks in advance ....
 
Massimo Delledonne
Istituto di Genetica Vegetale, Universita' Cattolica, Piacenza  Italy
 
delle at ipcucsc.bitnet or botanica at imicilea.cilea.it



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