IUBio

Codonfrequency and File of Sequences

KENNETH HATTER gburns at aardvark.ucs.uoknor.edu
Thu Aug 12 22:30:00 EST 1993


While trying to build a codonfrequency table and use composition on several
hundred sequences I have come to wish that these two programs accepted either a
file of filenames (e.g. @seq.fil) or ambiguous filenames (e.g. *.cod).

The GCG manual offers only the /continue option for the codofrequency program,
but I am hoping that a great BioNetter has better insight and ability than I in
this matter.  

The coding regions of each protein have been written into individual files 
so I need a way to say "take this list of sequences and determine the 
codonfrequency or composition." 

Thanks in advance for any help.

Kenneth Hatter
Research Technician



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