IUBio

Installing SRS5.1.0. under linux

Tõnu margus tmargus at ebc.ee
Wed Feb 7 08:17:58 EST 2001


Hi,

I have problem to install SRS5.1.0 on Linux (Slackware Linux v 2.2.18)
In IRIX 6.4 it compile without problems.

     gcc  -I/export2/tmargus/tri/srs/bin/linux  -o
/export2/tmargus/tri/srs/bin/linux
     /nodd /export2/tmargus/tri/srs/bin/linux/nodd.o
/export2/tmargus/tri/srs/bin/lin
     ux/local.o /export2/tmargus/tri/srs/bin/linux/libsrs.a
     /export2/tmargus/tri/srs/bin/linux/libsrs.a(icadebug.o): In
function `DbgIopStat
     ement':
     icadebug.o(.text+0xa2): undefined reference to `TermNewLineEditor'
     icadebug.o(.text+0x111): undefined reference to `TermLineEdit'
     collect2: ld returned 1 exit status
     make: *** [/export2/tmargus/tri/srs/bin/linux/nodd] Error 1
     srsmake: Stopping due to Error 2
     srsinstall: Stopping due to Error 1


I checked what peoples have write about this problem.

     Tim Cutt suggest

http://bionet.hgmp.mrc.ac.uk/hypermail/bio-srs/bio-srs.199906/0008.html
     2) The problem is in a #include statement somewhere (I can't
remember
     where). I think you need to change a #include <termio.h> to
#include
     <termios.h> or vice versa The change needs to be made either in
     icadebug.c itself, or in one of the include files it uses.

I replaced termio.h in icadebug.c with termios.h
( only   termio.c and termio.h contained  a string termio.h. I didnt
make replacement in these files.)
This cause an other error

     cc  -I/usr/local/bin1/srs/bin/linux  -O2 -D__ODD
-DSRSINCLUDE=\"srs5.h\" -c -o /usr/local/bin1/srs/bin/l
     ux/user.o user.c; ar r /usr/local/bin1/srs/bin/linux/libsrs.a
/usr/local/bin1/srs/bin/linux/user.o; /bin
     m -f /usr/local/bin1/srs/bin/linux/user.o
     ranlib /usr/local/bin1/srs/bin/linux/libsrs.a
     cc  -I/usr/local/bin1/srs/bin/linux  -o
/usr/local/bin1/srs/bin/linux/nodd /usr/local/bin1/srs/bin/linux
     odd.o /usr/local/bin1/srs/bin/linux/local.o
/usr/local/bin1/srs/bin/linux/libsrs.a
     /usr/local/bin1/srs/bin/linux/libsrs.a(icabnf.o): In function
`IopNodeProg_':
     icabnf.o(.text+0x1253): undefined reference to `DbgGetStatement'
     icabnf.o(.text+0x1268): undefined reference to `DbgGetStatement'
     /usr/local/bin1/srs/bin/linux/libsrs.a(icaop.o): In function
`IopContinue':
     icaop.o(.text+0x556c): undefined reference to `DbgSetContinue'
     /usr/local/bin1/srs/bin/linux/libsrs.a(icaop.o): In function
`IopNext':
     icaop.o(.text+0x5578): undefined reference to `DbgSetNext'
     collect2: ld returned 1 exit status
     make: *** [/usr/local/bin1/srs/bin/linux/nodd] Error 1
     srsmake: Stopping due to Error 2
     srsinstall: Stopping due to Error 1

Have any idea how to overcome ?

Thanks in advance



Tõnu Margus             E-mail  tmargus at ebc.ee

Tartu University
Riia 23
Tartu 51010
Estonia



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