blast on srs5.1

Frederic PLEWNIAK plewniak at igbmc.u-strasbg.fr
Tue Jan 20 05:15:25 EST 1998

>         I think it's not only an expected GCG ouput, it is also because
> different version of blast gives different output. We experienced such
> problems with DBWatcher...
>         If I remember correctly, Fred found a way to parse easily
> both outputs, but, Fred is out this week, so he will confirm next
> week if I'm right.
>                                                 François.
Oh! my... Just comin' back from a sweet quiet week off lab and now...
François, you're too fast to jump onto your keyboard ;o)... Sorry to
let you down but DBWatcher doesn't really parse title lines in BLAST
output. Not the way SRS does anyway! And it is certainly not able
to tell the accession number from the ID... Sorry...


More information about the Bio-srs mailing list

Send comments to us at biosci-help [At] net.bio.net