Aengus Stewart wrote:
>> I am currently trying to link in the results of FASTA and
> SCANPS(smith-waterman) to the SRS server at the EBI.
>> However the format of the hits does not give the data library from which
> the sequence was derived only the name and and the accession number, eg
>> ...
> The best scores are: initn init1 opt z-sc
> E(473814)
> BB L32145 Borrelia burgdorferi C62.5 heat ( 236) 1180 1180 1180
> 892.7 0
> ...
>> therefore,
>>http://<ipname>/srs5bin/cgi-bin/wgetz?[database-id:id]+-e
>> will not work as it goes directly to a single entry.
>> I have tried incorporating the query that is returned when I do the
> search within a live SRS session eg
>> Query "[libs={embl emblnew}-AccNumber: L32145*] " found 1 entries
>>http://srs.ebi.ac.uk:5000/srs5bin/cgi-bin/wgetz?[libs={embl> emblnew}-AccNumber: L32145*]+-e
>> However this returns arguments missing.
> I have tried variations on this to no avail.
>> Is it possible?
>> Aengus
>
How about:
http://srs.ebi.ac.uk:5000/srs5bin/cgi-bin/wgetz?[embl-acc:L32145|emblnew-acc:L32145]+-e
Cheers,
Martin
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