NRSub Release 6 (October 1995)
The release 6 of NRSub (the Non-Redundant Bacillus subtilis data
base) is now available through anonymous FTP at URLs:
ftp://biom3.univ-lyon1.fr/pub/nrsub/
or
ftp://ftp.nig.ac.jp/pub/db/nrsub/
It is also possible to access NRSub through two World-Wide Web
servers located at URLs:
http://acnuc.univ-lyon1.fr/nrsub/nrsub.html
or
http://ddbjs4h.genes.nig.ac.jp/
The distribution includes:
- The flat version of NRSub in EMBL format (file NRSub.dat or
NRSub.dat.Z).
- The NRSub database under ACNUC and the sources of the query
program for line mode use (file NRSub.r6.tar.Z).
- The binaries of the graphical interface for browsing an ACNUC
database (files query_win.*.Z). Query_win.SUN file is for Sun
under SunOS, query_win.SOL is for Sun under Solaris,
query_win.RS6000 is for IBM RISC, query_win.ALPHA is for DEC
Alpha, and query_win.SGI is for Silicon Graphics.
NRSub release 6 contains a total of 245 contigs (62 composite)
All these sequences are chromosomal (plasmidic sequences are
removed) and totalize 1,483,324 bp. This represents approxi-
matively 35.6% of the entire Bacillus subtilis chromosome
consisting of about 4,165 kbp. These sequences contain 1334 CDS
(534 ORFs), 72 tRNAs and 27 rRNAs. Also, 483 bibliographic
references can be accessed.
Guy Perriere
Laboratoire de Biometrie, Genetique et
Biologie des Populations, URA CNRS 2055
Universite Claude Bernard - Lyon 1
43, bd. du 11 Novembre 1918
69622 Villeurbanne Cedex
France
Email: perriere at biomserv.univ-lyon1.fr
--
===============================================================================
Thure Etzold | EMBL
E-mail: etzold at embl-heidelberg.de | Postfach 10.2209
Tel: (49) 6221 387529 | 69012 Heidelberg
Fax: (49) 6221 387517 | Germany
