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PDB Structures w/ SRS-WWW

Rodrigo Lopez rodrigol at biomaster.uio.no
Thu Oct 5 04:56:44 EST 1995


Here follows a simple modificatiom to the showpdb csh script that should
enable managers using the standard PDB distribution directories (i.e.
storing entries in various directories) to use the approach I posted 
yesterday to get SRS-WWW to 'serve' structures to a PDBviewer.
 
The original posting works if you have PDB in a single directory.

-----------------------------------------------------------------------
#!/sbin/csh -f

while ("$1" != "")
set tst=`echo $argv[1] | tr '[A-Z]' '[a-z]'`
shift

echo Content-type: chemical/x-pdb;
echo

# The following contains the absolute path of where you store
# the PDB distribution files. Uncomment the following line if
# you have PDB in a single directory.
# cat /usr3/PDB/"$tst"
#
# For PDB stored in various directories. Replace the period with
# the absolute path (where the top PDB distribution directory is)
# Could look somethin like this:
# find /databases/PDB -name "$tst" -print -exec cat {}\;

find . -name "$tst" -print -exec cat {}\;

end
------------------------------------------------------------------------



R:)






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