I have been using blastall on my linux server very happyly till I
downloaded the last version of the nr database, which was splitted
into 2 packages nr.00 and nr.01. When I run my blastx searches against
this database the BLAST interrupted and I got a "segementation
violation" error message.
I have been cheking with other databases like the refseq and
everything worked fine. I also checked that this problem only happens
with the nr.01 database. I can run BLASTX using -d nr.00, with about
2000 sequences in a fasta file as a query, without problems. When I
try -d nr or -d nr.01 with the same fasta file, the BLAST interrupts
and I get the segementation violation error message.
I thought that the nr.01.tar.gz was corrupted during the download, but
I have downloaded this file at least 4 times during the last month, so
if the file was corrupted during the download it happened everytime
and did not happen with the other databases I downloead at the sanme
Can anyone help me?
Thank you very much in advance
@@@ O @@ O @ Dr. Javier Terol Alcayde
@ O @@@@ O @ Instituto Valenciano de Investigaciones Agrarias
@@@ O @@@@ Carretera Moncada - Náquera, Km. 4,5
@@@@ O @ 46113 Moncada (Valencia)
|| Tel. 96 342 4000 ext. 70160
|| Fax. 96 342 4001