IUBio

[Bio-software] Re: Consed: combine amplicons of same individual

Christiaan Karreman Karreman at onkochemie.uni-duesseldorf.de
Tue Oct 10 00:58:03 EST 2006


Maybe the Align function of AiO (http://134.99.88.55/aio/) combined with
the master sequence option is what you want.

It will optimize all alignments to one 'master' sequence and the output can
be in pure text (ASCII) so you can manipulate further.

See the handbook (http://134.99.88.55/aio/manual.pdf) at page 35.



Christiaan






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