Have you seen this page? There's a simple script which parses the
Elango, Palchamy (ICRISAT-IN) wrote:
> I am using Polybayes program [Author: Prof. Gabor T. Marth] for SNP analysis.
>> I wish to parse and extract SNP associated information from the output (textual mulitple sequence alignment) of Polybayes program.
>> Alternatively I am trying out the possibilities of converting the polybayes alignment output into any standard multiple alignment format, so that I can able to use other SNP analysis programs that read multiple sequence alignment files as input.
>> I wish to use your parser script or any bioperl / biojava module.
> Does anyone know or use any bioperl /biopython /biojava module ?
> I shall be grateful if you could kindly provide me some tips or additional information on this.
>> Thanking you
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>pelango at cgiar.org <mailto:pelango at cgiar.org> www.cgiar.org <http://www.cgiar.org> elango at palchamy.com <mailto:elango at palchamy.com>