> I am a software developer in a microbiology lab.
> EMBOSS has functions such as DREG, PREG to do the regular expression search of
> a nucleotide sequence. Since most of our own softwares are programmed in JAVA,
> I am trying to find the JAVA implementation of DREG, PREG, and FUZZNUC and
> FUZZPRO so that we can import these ambiguity sequence searching functions
> into our own softwares.
>> Thanks for any help!
>> Biochemistry and Microbiology
> University of Victoria
> BC, Canada
>>adelej at uvic.ca>> ---
>Java now has the REGEX package in its standard library, which can do