IUBio Biosequences .. Software .. Molbio soft .. Network News .. FTP

profile searching

Michael Beckstette mbeckste at hb-networks.de
Mon Feb 12 07:04:47 EST 2001


i have developed a new algorithm for approximative pattern matching with 
sequence-profiles (position specific scoring matrices) like the ones in 
PROSITE in complete genomes or large databases. What i need now is
a strategie to convert alignmentblocks to profiles (as PRG profmake does).
Has anyone an idea ?

so long Michael

More information about the Bio-soft mailing list

Send comments to us at biosci-help [At] net.bio.net