Colours to multiple alignment

Aedin Culhane Aedin.Culhane at bbsrc.ac.uk
Fri Sep 8 09:52:21 EST 2000

Try GeneDoc, it accepts both and will do exactly what you need.

Virpi Ahola wrote:

> hi,
> I've done a multiple sequence alignment to the protein sequences. In
> addition, I've a secondary structure assignments for each sequence
> derived from DSSP. Does anybody know a software that combines these two
> files so that the different seconary structure periods would be marked
> with the different colour in the multiple alignment ?
> Thanks for all tips,
> Virpi

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