c/c++ alignment software

Ron Lundstrom rlund at hci.utah.edu
Tue Nov 9 17:17:08 EST 1999

Can anyone recommend c++ classes for doing Sequence Alignment?

I would like callable routines for Smith-Waterman if possible.

I am looking for a programming interface that can be linked into
my own programs, not a user interface.

Does anyone know a current link for the Molbio++ library?
It may have what I want.

Thanks in advance

Ron Lundstrom

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