EST clustering

Todd Scheetz todd-scheetz at uiowa.edu
Sun May 2 14:58:32 EST 1999


Take a look at a program called tlcluster. It was developed here at the
University of Iowa, and was designed specifically for clustering ESTs.
It is available for download from 

I may be able to help with questions about the ICAtools, but it's been
about a year since we used them here. We developed tlcluster as a
replacement when the run-time of ICAtools became prohibitive.

-Todd Scheetz
Genetics Ph.D. Program
University of Iowa

Tvenkatesh at synapticcorp.com wrote:
> Dear All
> I am looking for EST clustering software. I would appreciate any
> suggestions.
> Also I would like to get in touch with some one in USA who has used JD
> Parsons ICA tools
> to clarify some questions I have.
> Thanks
> Venky
> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> T. V. (Venky) Venkatesh, Ph D
> Senior Scientist (Bioinformatics and Molecular Biology)
> Synaptic Pharmaceutical Corporation
> 215 College Road
> Paramus NJ 07652 - 1431
> 201-261-1331x720 (Phone)
> 201-261-0623(Fax)
> Tvenkatesh at synapticcorp.com

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