Venky,
Take a look at a program called tlcluster. It was developed here at the
University of Iowa, and was designed specifically for clustering ESTs.
It is available for download from
http://ratest.eng.uiowa.edu/pubsoft/software.html.
I may be able to help with questions about the ICAtools, but it's been
about a year since we used them here. We developed tlcluster as a
replacement when the run-time of ICAtools became prohibitive.
-Todd Scheetz
Genetics Ph.D. Program
University of Iowa
Tvenkatesh at synapticcorp.com wrote:
>> Dear All
> I am looking for EST clustering software. I would appreciate any
> suggestions.
> Also I would like to get in touch with some one in USA who has used JD
> Parsons ICA tools
> to clarify some questions I have.
> Thanks
> Venky
>> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> T. V. (Venky) Venkatesh, Ph D
> Senior Scientist (Bioinformatics and Molecular Biology)
> Synaptic Pharmaceutical Corporation
> 215 College Road
> Paramus NJ 07652 - 1431
> 201-261-1331x720 (Phone)
> 201-261-0623(Fax)
>Tvenkatesh at synapticcorp.com
