Secondary Structure Prediction

plantscigroup at my-dejanews.com plantscigroup at my-dejanews.com
Fri Mar 5 08:59:57 EST 1999

In article <7bmcpu$rhp at web3.tcd.ie>,
  tpwalsh at acer.gen.tcd.ie (Urmhumhan) wrote:
> m.hirshberg at mole.bio.cam.ac.uk wrote:
> >>
> >>What are the best 2D predictors availible ?
> >>I am both looking for general predictors and specialized, such as only
> >>for helices, strands etc.
> >
> >there are many try for example
> >
> >Jpred on http://circinus.ebi.ac.uk:8081/
>  Two of the best are:
>  PHD: http://www.embl-heidelberg.de/predictprotein/ppDoPred.html
>  DSC: http://bonsai.lif.icnet.uk/bmm/dsc/

The following server is supposedly the most accurate currently available:

PSIPRED: http://globin.bio.warwick.ac.uk/psipred

Gary Marcher

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