I'm interested in searching the protein database with 200 proteins on a
I have a system to do the searches (FASTA) in batch locally (via a perl
script), but I'd like to be notified when there's a new hit with good
Somehow an old and new reuslt file has to be compared.
Does anyone have a program to do this sort of thing?
I've used swiss-shop, but I eventually want to incorporate this
notification into another program for displaying the results graphically.
Any ideas appreciated!