Why not use webblast?
It is designed to do so.
The current version runs on unix and windows9x/NT
You can get it from
http://www.genet.sickkids.on.ca/bioinfo_resources/software.html
Alex.
>Hi,
> Is there a simple way to send off 200 blast searches to NCBI or other
>server and have them return the results in HTML or text format?
>>Thanks,
> Chris