Qiao Li-An wrote:
>> Hello All,
>> We can use SRS method to download a few PDB files, just click the
> search results one by one. But when we want to download thousands of
> protein structure PDB files, the task seems tedious.
>> Now I have a list of PDB Entry ID Code. How can I get these PDB files
> from www directly? Could I use ftp to get all of them?
In theory you can get _all_ PDB files by ftp; but they are 1.3 Gbytes
compressed!
Else you can prepare a script file for ftp (if you use some sort of
unix):
example.txt:
anonymous
cd all_entries/compressed_files
get pdb2sod.ent.Z
get pdb9rnt.ent.Z
...
quit
then:
ftp ftp.pdb.bnl.gov <example.txt
You'll need to type your email address as password.
Mogens
--
Mogens Kjaer, Carlsberg Laboratory, Dept. of Chemistry
Gamle Carlsberg Vej 10, DK-2500 Valby, Denmark
Phone: +45 33 27 53 25, Fax: +45 33 27 47 08
Email: mk at crc.dk Homepage: http://www.crc.dk
